Dashboard
Column
Screened (Target): 1070 (1500)
Enrolled (Target): 430 (609)
Average screened per month
87Average enrolled per month
33Column
Study Flow & Monthly Cascade (Cumulative Numbers), Updated on 2023-04-04
Daily trend of screening and enrollment
Monthly trend of screening and enrollment
Column
Follow-up status at enroll and follow-up visits (Cumulative Numbers)
Follow-up status by number of visits (Head count)
% of number of visits at each follow-up month
Study Data
Column
Characteristics
| HPV Result | ||
|---|---|---|---|
Characteristic | Total N = 10371 | Positive 450 (43.4)1 | Negative 587 (56.6)1 |
Study Strata | |||
FSW <30 HIV- | 404 (44.2) | 184 (46.8) | 220 (42.3) |
FSW <30 HIV+ | 31 (3.4) | 17 (4.3) | 14 (2.7) |
FSW 30+ HIV- | 358 (39.2) | 136 (34.6) | 222 (42.7) |
FSW 30+ HIV+ | 88 (9.6) | 41 (10.4) | 47 (9.0) |
MSM <30 HIV- | 18 (2.0) | 5 (1.3) | 13 (2.5) |
MSM <30 HIV+ | 7 (0.8) | 7 (1.8) | 0 (0.0) |
MSM 30+ HIV- | 4 (0.4) | 0 (0.0) | 4 (0.8) |
MSM 30+ HIV+ | 3 (0.3) | 3 (0.8) | 0 (0.0) |
Missing | 124 | 57 | 67 |
Age category | |||
<30 | 473 (50.8) | 221 (54.7) | 252 (47.7) |
30+ | 459 (49.2) | 183 (45.3) | 276 (52.3) |
Missing | 105 | 46 | 59 |
Gender Category | |||
FSW | 994 (96.4) | 430 (96.4) | 564 (96.4) |
MSM | 37 (3.6) | 16 (3.6) | 21 (3.6) |
Missing | 6 | 4 | 2 |
HIV Status | |||
Negative | 877 (86.2) | 364 (82.9) | 513 (88.8) |
Positive | 140 (13.8) | 75 (17.1) | 65 (11.2) |
Missing | 20 | 11 | 9 |
1n (%) | |||
GeneXpert Results
Column
LTFU by months & visits
Missing AGE
Missing SEX
Missing HIV Status
R Session Info
R version 4.2.2 (2022-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 22621)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8
[2] LC_CTYPE=English_United States.utf8
[3] LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] flexdashboard_0.6.1 glue_1.6.2 sjlabelled_1.2.0
[4] gtsummary_1.7.0 lubridate_1.9.2 forcats_1.0.0
[7] stringr_1.5.0 dplyr_1.1.0 purrr_1.0.1
[10] readr_2.1.4 tidyr_1.3.0 tibble_3.1.8
[13] ggplot2_3.4.1 tidyverse_2.0.0
loaded via a namespace (and not attached):
[1] fontquiver_0.2.1 insight_0.19.0 httr_1.4.5
[4] tools_4.2.2 bslib_0.4.2 DT_0.27
[7] utf8_1.2.3 R6_2.5.1 lazyeval_0.2.2
[10] colorspace_2.1-0 withr_2.5.0 tidyselect_1.2.0
[13] curl_5.0.0 compiler_4.2.2 textshaping_0.3.6
[16] cli_3.6.0 gt_0.8.0 flextable_0.8.6
[19] xml2_1.3.3 officer_0.6.0 plotly_4.10.1
[22] fontBitstreamVera_0.1.1 labeling_0.4.2 sass_0.4.5
[25] scales_1.2.1 askpass_1.1 systemfonts_1.0.4
[28] commonmark_1.8.1 digest_0.6.31 foreign_0.8-83
[31] rmarkdown_2.20 gfonts_0.2.0 rio_0.5.29
[34] pkgconfig_2.0.3 htmltools_0.5.4 fastmap_1.1.1
[37] highr_0.10 htmlwidgets_1.6.1 rlang_1.0.6
[40] readxl_1.4.2 rstudioapi_0.14 httpcode_0.3.0
[43] shiny_1.7.4 jquerylib_0.1.4 farver_2.1.1
[46] generics_0.1.3 jsonlite_1.8.4 crosstalk_1.2.0
[49] zip_2.2.2 magrittr_2.0.3 Rcpp_1.0.10
[52] munsell_0.5.0 fansi_1.0.4 gdtools_0.3.1
[55] lifecycle_1.0.3 stringi_1.7.12 yaml_2.3.7
[58] snakecase_0.11.0 grid_4.2.2 promises_1.2.0.1
[61] crayon_1.5.2 haven_2.5.1 hms_1.1.2
[64] knitr_1.42 pillar_1.8.1 uuid_1.1-0
[67] crul_1.3 evaluate_0.20 fontLiberation_0.1.0
[70] data.table_1.14.8 broom.helpers_1.12.0 ggprism_1.0.4
[73] vctrs_0.5.2 tzdb_0.3.0 httpuv_1.6.9
[76] cellranger_1.1.0 openssl_2.0.5 gtable_0.3.1
[79] cachem_1.0.7 openxlsx_4.2.5.2 xfun_0.37
[82] mime_0.12 janitor_2.2.0 xtable_1.8-4
[85] later_1.3.0 ragg_1.2.5 viridisLite_0.4.1
[88] memoise_2.0.1 timechange_0.2.0 ellipsis_0.3.2 package * version date (UTC) lib source
askpass 1.1 2019-01-13 [1] CRAN (R 4.2.1)
broom.helpers 1.12.0 2023-02-09 [1] CRAN (R 4.2.2)
bslib 0.4.2 2022-12-16 [1] CRAN (R 4.2.2)
cachem 1.0.7 2023-02-24 [1] CRAN (R 4.2.2)
cellranger 1.1.0 2016-07-27 [1] CRAN (R 4.2.1)
cli 3.6.0 2023-01-09 [1] CRAN (R 4.2.2)
colorspace 2.1-0 2023-01-23 [1] CRAN (R 4.2.2)
commonmark 1.8.1 2022-10-14 [1] CRAN (R 4.2.2)
crayon 1.5.2 2022-09-29 [1] CRAN (R 4.2.1)
crosstalk 1.2.0 2021-11-04 [1] CRAN (R 4.2.1)
crul 1.3 2022-09-03 [1] CRAN (R 4.2.2)
curl 5.0.0 2023-01-12 [1] CRAN (R 4.2.2)
data.table 1.14.8 2023-02-17 [1] CRAN (R 4.2.2)
digest 0.6.31 2022-12-11 [1] CRAN (R 4.2.2)
dplyr * 1.1.0 2023-01-29 [1] CRAN (R 4.2.2)
DT 0.27 2023-01-17 [1] CRAN (R 4.2.2)
ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.2.1)
evaluate 0.20 2023-01-17 [1] CRAN (R 4.2.2)
fansi 1.0.4 2023-01-22 [1] CRAN (R 4.2.2)
farver 2.1.1 2022-07-06 [1] CRAN (R 4.2.1)
fastmap 1.1.1 2023-02-24 [1] CRAN (R 4.2.2)
flexdashboard * 0.6.1 2023-01-23 [1] CRAN (R 4.2.2)
flextable 0.8.6 2023-02-23 [1] CRAN (R 4.2.2)
fontBitstreamVera 0.1.1 2017-02-01 [1] CRAN (R 4.2.0)
fontLiberation 0.1.0 2016-10-15 [1] CRAN (R 4.2.0)
fontquiver 0.2.1 2017-02-01 [1] CRAN (R 4.2.2)
forcats * 1.0.0 2023-01-29 [1] CRAN (R 4.2.2)
foreign 0.8-83 2022-09-28 [2] CRAN (R 4.2.2)
gdtools 0.3.1 2023-02-17 [1] CRAN (R 4.2.2)
generics 0.1.3 2022-07-05 [1] CRAN (R 4.2.1)
gfonts 0.2.0 2023-01-08 [1] CRAN (R 4.2.2)
ggplot2 * 3.4.1 2023-02-10 [1] CRAN (R 4.2.2)
ggprism 1.0.4 2022-11-04 [1] CRAN (R 4.2.2)
glue * 1.6.2 2022-02-24 [1] CRAN (R 4.2.1)
gt 0.8.0 2022-11-16 [1] CRAN (R 4.2.2)
gtable 0.3.1 2022-09-01 [1] CRAN (R 4.2.1)
gtsummary * 1.7.0 2023-01-13 [1] CRAN (R 4.2.2)
haven 2.5.1 2022-08-22 [1] CRAN (R 4.2.1)
highr 0.10 2022-12-22 [1] CRAN (R 4.2.2)
hms 1.1.2 2022-08-19 [1] CRAN (R 4.2.1)
htmltools 0.5.4 2022-12-07 [1] CRAN (R 4.2.2)
htmlwidgets 1.6.1 2023-01-07 [1] CRAN (R 4.2.2)
httpcode 0.3.0 2020-04-10 [1] CRAN (R 4.2.2)
httpuv 1.6.9 2023-02-14 [1] CRAN (R 4.2.2)
httr 1.4.5 2023-02-24 [1] CRAN (R 4.2.2)
insight 0.19.0 2023-01-30 [1] CRAN (R 4.2.2)
janitor 2.2.0 2023-02-02 [1] CRAN (R 4.2.2)
jquerylib 0.1.4 2021-04-26 [1] CRAN (R 4.2.1)
jsonlite 1.8.4 2022-12-06 [1] CRAN (R 4.2.2)
knitr 1.42 2023-01-25 [1] CRAN (R 4.2.2)
labeling 0.4.2 2020-10-20 [1] CRAN (R 4.2.0)
later 1.3.0 2021-08-18 [1] CRAN (R 4.2.1)
lazyeval 0.2.2 2019-03-15 [1] CRAN (R 4.2.1)
lifecycle 1.0.3 2022-10-07 [1] CRAN (R 4.2.1)
lubridate * 1.9.2 2023-02-10 [1] CRAN (R 4.2.2)
magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.2.1)
memoise 2.0.1 2021-11-26 [1] CRAN (R 4.2.1)
mime 0.12 2021-09-28 [1] CRAN (R 4.2.0)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.2.1)
officer 0.6.0 2023-02-17 [1] CRAN (R 4.2.2)
openssl 2.0.5 2022-12-06 [1] CRAN (R 4.2.2)
openxlsx 4.2.5.2 2023-02-06 [1] CRAN (R 4.2.2)
pillar 1.8.1 2022-08-19 [1] CRAN (R 4.2.1)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.2.1)
plotly 4.10.1 2022-11-07 [1] CRAN (R 4.2.2)
promises 1.2.0.1 2021-02-11 [1] CRAN (R 4.2.1)
purrr * 1.0.1 2023-01-10 [1] CRAN (R 4.2.2)
R6 2.5.1 2021-08-19 [1] CRAN (R 4.2.1)
ragg 1.2.5 2023-01-12 [1] CRAN (R 4.2.2)
Rcpp 1.0.10 2023-01-22 [1] CRAN (R 4.2.2)
readr * 2.1.4 2023-02-10 [1] CRAN (R 4.2.2)
readxl 1.4.2 2023-02-09 [1] CRAN (R 4.2.2)
rio 0.5.29 2021-11-22 [1] CRAN (R 4.2.1)
rlang 1.0.6 2022-09-24 [1] CRAN (R 4.2.1)
rmarkdown 2.20 2023-01-19 [1] CRAN (R 4.2.2)
rstudioapi 0.14 2022-08-22 [1] CRAN (R 4.2.1)
sass 0.4.5 2023-01-24 [1] CRAN (R 4.2.2)
scales 1.2.1 2022-08-20 [1] CRAN (R 4.2.1)
sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.2.1)
shiny 1.7.4 2022-12-15 [1] CRAN (R 4.2.2)
sjlabelled * 1.2.0 2022-04-10 [1] CRAN (R 4.2.1)
snakecase 0.11.0 2019-05-25 [1] CRAN (R 4.2.1)
stringi 1.7.12 2023-01-11 [1] CRAN (R 4.2.2)
stringr * 1.5.0 2022-12-02 [1] CRAN (R 4.2.2)
systemfonts 1.0.4 2022-02-11 [1] CRAN (R 4.2.1)
textshaping 0.3.6 2021-10-13 [1] CRAN (R 4.2.1)
tibble * 3.1.8 2022-07-22 [1] CRAN (R 4.2.1)
tidyr * 1.3.0 2023-01-24 [1] CRAN (R 4.2.2)
tidyselect 1.2.0 2022-10-10 [1] CRAN (R 4.2.1)
tidyverse * 2.0.0 2023-02-22 [1] CRAN (R 4.2.2)
timechange 0.2.0 2023-01-11 [1] CRAN (R 4.2.2)
tzdb 0.3.0 2022-03-28 [1] CRAN (R 4.2.1)
utf8 1.2.3 2023-01-31 [1] CRAN (R 4.2.2)
uuid 1.1-0 2022-04-19 [1] CRAN (R 4.2.0)
vctrs 0.5.2 2023-01-23 [1] CRAN (R 4.2.2)
viridisLite 0.4.1 2022-08-22 [1] CRAN (R 4.2.1)
withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.2)
xfun 0.37 2023-01-31 [1] CRAN (R 4.2.2)
xml2 1.3.3 2021-11-30 [1] CRAN (R 4.2.1)
xtable 1.8-4 2019-04-21 [1] CRAN (R 4.2.1)
yaml 2.3.7 2023-01-23 [1] CRAN (R 4.2.2)
zip 2.2.2 2022-10-26 [1] CRAN (R 4.2.2)
[1] C:/Users/drmyo/AppData/Local/R/win-library/4.2
[2] C:/Program Files/R/R-4.2.2/library